Identification (large datasets)

Flexible analysis and organisation of large scale proteomics experiments.

This software package enables Users to perform the following:

  • Combine multiple complex Scaffold experiments, or directly load Mascot or PEAKS mzIdentML files
  • Analyze your data using PCA and heatmaps from unlimited categorization of massive numbers of samples.
  • Robust, iterative filtering to find proteins of interest.
  • Adaptive differential expression colouring to make experimental protein changes easy to identify.
  • Share data using the free Scaffold LFQ Viewer or exportable reports and graphics
Scaffold LFQ protein view

FREE Evaluation

To register for a free 14 day trial of Scaffold or to learn more, please visit the Proteome Software web site – Free Trial.

Further Information

See Downloadable Resources for further technical information or visit Proteome Software Documentation.

Please contact us if you can not find the information your require or would like a quotation.