Scaffold Elements

Flexible analysis of Metabolomics experiments.

Metabolites are identified using multidimensional search and scoring algorithms. Scaffold Elements package enables Users to perform the following:

  • Load raw data from major vendor instruments, including Thermo, Sciex, and Agilent
  • Using MS1 or MS/MS data identify metabolites with confidence.
  • Drill down and interrogate results and track metabolite differentiation across samples.
  • Search multiple spectral libraries including NIST, METLIN, HMDB, and LIPID MAPS
  • Create personal spectral libraries using spectra from your instrument
  • Share data and collaborate with the Free Viewer.
  • Command Line Interface to automate your DIA experiments
Scaffold Elements Sample view

Automation: Scaffold can be written into your analysis pipelines using its command-line interface.

FREE Evaluation

To register for a free 14 day trial of Scaffold or to learn more, please visit the Proteome Software web site – Free Trial.

Further Information

See Downloadable Resources for further technical information or visit Proteome Software Documentation.

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