Phosphorylation Site Identification

Confident Post Translational Modification analysis

It enables fast comparison of PTM rates across many samples with clear charts that make instant figures for powerpoint presentations & posters.

  • Find trends with built-in motif hunting and visualization.
  • Harness Ascore(Beausoleil et al.,2006): the standard in site Phosphorylation site assignment.
  • Compare modification rates between multiple samples.
  • Take advantage of mzIdentML open-standard format.
  • Import multiplexed quantitative Scaffold Q+ results.
PTM Protein view showing Phosphorylation sites

FREE Evaluation

To register for a free 14 day trial of Scaffold or to learn more, please visit the Proteome Software web site – Free Trial.

Further Information

See Downloadable Resources for further technical information or visit Proteome Software Documentation.

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